PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G332300.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 263aa    MW: 29256.2 Da    PI: 6.7292
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G332300.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH185.2e-06146187955
                        HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +r RR+r  + +  LrellP++     +K +  ++ e++++YIk+Lq
  Aqcoe2G332300.2.p 146 DRLRRARKTENLKALRELLPHS-----RKGTILAVTEEVIDYIKYLQ 187
                        799******************8.....788899999**********9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.39E-5135191No hitNo description
PROSITE profilePS5088811.045137186IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.36E-7138197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.5E-6140196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.0098143192IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MPQGLFLPVS SRARQTVFQF EEEIIGNNSG RASDFNATDF SYNMDAKKVS MLGANDNSHK  60
DLQNSHVNLD KDYCDVPTGG ELILYGEGGS QRKLLSAANR NGDIDQNHTL TAQEPIREGI  120
KSSQHPAVIP RPTPRKRAAT ESSSSDRLRR ARKTENLKAL RELLPHSRKG TILAVTEEVI  180
DYIKYLQLQI KVLTQSRLGG EPTFDPFIHL EGFGHYLLHD QMLNEPLEMT IGRMMEGNML  240
AVTQLLETKG LYVMPIPSEP GP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.18e-22LJRHL1-like 1